Anne-Claire Haury, PhD
Center for Computational Biology
Ecole des Mines de Paris
35, rue Saint-Honore
77305 Fontainebleau cedex, France
e-mail: firstname.lastname@example.org (remove .spam)
I'm a data scientist interested in many applications and fields. I am particularly interested in high dimensional problems and feature selection.
During my PhD thesis, I tackled two main problems, namely signature selection for breast cancer prognosis and gene regulation network (GRN) inference. Our GRN inference method, TIGRESS, was ranked 2nd on in silico data and 3rd overall at the DREAM5 challenge.
Since then, I have worked on several machine learning applications, such as social recruitment, flight incident prediction and visual recognition for fashion items.
I'm always interested in new and challenging opportunities !
Full resume here : french
Haury A-C (2012), "Feature selection from gene expression data : Molecular signatures for breast cancer prognosis and gene regulatory network inference", PhD Thesis.
>> Thesis (PDF)
>> Defense slides
Haury A-C, Mordelet F, Vera-Licona P, Vert J-P (2012),"TIGRESS: Trustful Inference of Gene REgulation using Stability Selection.", BMC Systems Biology 2012, 6:145. doi:10.1186/1752-0509-6-145 Link.
>> MATLAB code
>> Also have a look at the TIGRESS
Haury A-C, Gestraud P, Vert J-P (2011),"The Influence of Feature Selection Methods on Accuracy, Stability and Interpretability of Molecular Signatures.", PLoS ONE 6(12): e28210. doi:10.1371/journal.pone.0028210. Link.
>> MATLAB Code
Haury A-C, Jacob L, Vert J-P (2010), "Improving stability and interpretability of gene expression signatures.", arXiv 1001.3109. Link
"TIGRESS: Trustful Inference of Gene REgulation using Stability Selection." Haury A-C, Mordelet F, Vera-Licona P, Vert J-P, 2011.
MLCB (NIPS workshop) 2011 , Granada, Spain, December 2011
>> Slides / Video
"The Influence of Feature Selection Methods on Accuracy, Stability and Interpretability of Molecular Signatures." Haury A-C, Gestraud P, Vert J-P, 2011.
MLSB 2010 , Edinburgh, Scottland, October 2010
>> Proceedings / Video
"Selection de signatures a partir de donnees genomiques. Application au diagnostic/pronostic du cancer."
Groupe de travail en statistiques et biostatistiques , Université de Nancy, France, June 2010
Séminaire Mathématiques et Systemes , Ecole des Mines de Paris, France, February 2010
SMPGD 2010, Marseille Luminy, France, January 2010
During Spring 2011, I visited Sandrine Dudoit's team in UC Berkeley for a RNA-seq project.
- currently : University Paris 7, Denis Diderot : Introduction to Data Mining for Msc Computer Science students.
- 2005 to 2013: Teaching at the University Paris 1, Panthéon-Sorbonne (Real Analysis, Topology, Probabilities and Statistics)
- Event 2012: Rencontre Formations/Métiers MASS , University Paris 1, Panthéon-Sorbonne. Organizer.
Event 2009: Rencontre Formations/Metiers MASS, University Paris 1, Panthéon-Sorbonne. Founder and organizer.