Supplements for the manuscript submitted to Bioinformatics

Simultaneous Inference of Biological Networks of Multiple Species from Genome-wide Data and Evolutionary Information: A Semi-supervised Approach
by Hisashi Kashima, Yoshihiro Yamanishi, Tsuyoshi Kato, Masashi Sugiyama and Koji Tsuda

Supplementary Material

Source code of Link Propagation

Gold standard metabolic network

Gene expression data

Cross-species sequence similarity