Saccharomyces cerevisiae -
Functional Catalogue

mips

 

mRNA processing (5'-, 3'-end processing, mRNA degradation) (48 ORFs)

YMR287c     MSU1     3'-5' exonuclease for RNA 3' ss-tail, mitochondrial
YBR120c     CBP6     apo-cytochrome B pre-mRNA processing protein
YJL209w     CBP1     apo-cytochrome b pre-mRNA processing protein
YKL208w     CBT1     apo-cytochrome b pre-mRNA processing protein
YOL123w     HRP1     CF Ib (RNA3' Cleavage factor Ib)
YLR115w     CFT2     cleavage and polyadenylation specificity factor, part of CF II
YOR250c     CLP1     cleavage/polyadenylation factor IA subunit
YGL094c     PAN2     component of PAB1P-stimulated poly(A) ribonuclease
YDR228c     PCF11    component of pre-mRNA 3'-end processing factor CF I
YGL044c     RNA15    component of pre-mRNA 3'-end processing factor CF I
YMR061w     RNA14    component of pre-mRNA 3'-end processing factor CF I
YJR093c     FIP1     component of pre-mRNA polyadenylation factor PF I
YLR277c     YSH1     component of pre-mRNA polyadenylation factor PF I
YKL025c     PAN3     component of the PAB1P-dependent poly(A) ribonuclease
YDR390c     UBA2     E1-like (ubiquitin-activating) enzyme
YGL097w     SRM1     GDP/GTP exchange factor for GSP1P/GSP2P
YJR036c     HUL4     hect domain E3 ubiquitin-protein ligase
YER032w     FIR1     interacts with the poly(A) polymerase in the two hybrid system
YGR158c     MTR3     involved in mRNA transport
YBR236c     ABD1     mRNA cap methyltransferase
YOL149w     DCP1     mRNA decapping enzyme
YGL130w     CEG1     mRNA guanylyltransferase (mRNA capping enzyme, alpha subunit)
YER165w     PAB1     mRNA polyadenylate-binding protein
YKL009w     MRT4     mRNA turnover 4
YGL173c     KEM1     multifunctional nuclease
YGL122c     NAB2     nuclear poly(A)-binding protein
YKR002w     PAP1     poly(A) polymerase
YPL190c     NAB3     polyadenylated RNA-binding protein
YDR301w     CFT1     pre-mRNA 3'-end processing factor CF II
YAL043c     PTA1     pre-tRNA processing protein / PF I subunit
YJR017c     ESS1     processing/termination factor 1
YPR107c     YTH1     protein of the 3' processing complex
YDR195w     REF2     RNA 3'-end formation protein
YPL228w     CET1     RNA 5'-triphosphatase (mRNA capping enzyme, beta subunit)
YMR180c     CTL1     RNA 5'-triphosphatase with manganese- or cobalt-dependent NTPase activities
YOR179c              similarity to BRR5 protein
YHR015w     MIP6     similarity to PES4 a PAB-like protein
YBL026w     LSM2     Sm-like (Lsm) protein
YDR378c     LSM6     Sm-like (Lsm) protein
YER112w     LSM4     Sm-like (Lsm) protein
YER146w     LSM5     Sm-like (Lsm) protein
YJL124c     LSM1     Sm-like (Lsm) protein
YLR438c-a   LSM3     Sm-like (Lsm) protein
YNL147w     LSM7     Sm-like (Lsm) protein
YPL178w     CBC2     small subunit of the nuclear cap-binding protein complex CBC
YOR159c     SME1     spliceosomal snRNA-associated Sm core protein required for mRNA splicing, also likely associated with telomerase TLC1 RNA
YCR077c     PAT1     topoisomerase II-associated protein
YGL141w     HUL5     ubiquitin-protein ligase (E3)
Back to MIPS Yeast Functional Categories Page.
Back to MIPS Genome Project Page.
Back to MIPS Homepage.
mail questions/comments to webmaster