Saccharomyces cerevisiae -
Functional Catalogue

mips


 

PROTEIN DESTINATION (586 ORFs)

YOL038w     PRE6     20S proteasome subunit (alpha4)
YJL001w     PRE3     20S proteasome subunit (beta1)
YOR157c     PUP1     20S proteasome subunit (beta2)
YER094c     PUP3     20S proteasome subunit (beta3)
YPR103w     PRE2     20S proteasome subunit (beta5)
YOR362c     PRE10    20S proteasome subunit C1 (alpha7)
YER012w     PRE1     20S proteasome subunit C11(beta4)
YGR135w     PRE9     20S proteasome subunit Y13 (alpha3)
YML092c     PRE8     20S proteasome subunit Y7 (alpha2)
YGL011c     SCL1     20S proteasome subunit YC7ALPHA/Y8 (alpha1)
YGR253c     PUP2     20S proteasome subunit(alpha5)
YMR314w     PRE5     20S proteasome subunit(alpha6)
YBL041w     PRE7     20S proteasome subunit(beta6)
YFR050c     PRE4     20S proteasome subunit(beta7)
YDL007w     RPT2     26S proteasome regulatory subunit
YDR394w     RPT3     26S proteasome regulatory subunit
YER021w     RPN3     26S proteasome regulatory subunit
YFR004w     RPN11    26S proteasome regulatory subunit
YFR052w     RPN12    26S proteasome regulatory subunit
YGL048c     RPT6     26S proteasome regulatory subunit
YHR027c     RPN1     26S proteasome regulatory subunit
YHR200w     RPN10    26S proteasome regulatory subunit
YIL075c     RPN2     26S proteasome regulatory subunit
YKL145w     RPT1     26S proteasome regulatory subunit
YOR117w     RPT5     26S proteasome regulatory subunit
YOR259c     RPT4     26S proteasome regulatory subunit
YOR261c     RPN8     26S proteasome regulatory subunit
YDL020c     RPN4     26S proteasome subunit
YGR270w     YTA7     26S proteasome subunit
YGR214w     RPS0A    40S ribosomal protein p40 homolog A
YLR048w     RPS0B    40S ribosomal protein p40 homolog B
YLR075w     RPL10    60S large subunit ribosomal protein
YIR006c     PAN1     actin-cytoskeleton assembly protein
YBR164c     ARL1     ADP-ribosylation factor
YOR094w     ARF3     ADP-ribosylation factor 3
YPL051w     ARL3     ADP-ribosylation factor-like protein, member of the arf-sar family in the ras superfamily
YBR199w     KTR4     alpha-1,2-mannosyltransferase
YBR205w     KTR3     alpha-1,2-mannosyltransferase
YDR483w     KRE2     alpha-1,2-mannosyltransferase
YER001w     MNN1     alpha-1,3-mannosyltransferase
YGL257c     MNT2     alpha-1,3-mannosyltransferases responsible for adding the terminal mannose residues of O-linked oligosaccharides
YIL014w     MNT3     alpha-1,3-mannosyltransferases responsible for adding the terminal mannose residues of O-linked oligosaccharides
YGL038c     OCH1     alpha-1,6-mannosyltransferase
YJR131w     MNS1     alpha1,2-mannosidase
YJR062c     NTA1     amino-terminal amidase
YKL103c     LAP4     aminopeptidase yscI precursor, vacuolar
YKL157w     APE2     aminopeptidase yscII
YKL135c     APL2     AP-1 complex subunit, beta1-adaptin, 82 KD
YPR029c     APL4     AP-1 complex subunit, gamma-adaptin, 94 KD
YPL259c     APM1     AP-1 complex subunit, mu1 subunit, 54 KD
YLR170c     APS1     AP-1 complex subunit, sigma1 subunit, 18 KD
YBL037w     APL3     AP-2 complex subunit, alpha-adaptin, 113 KD
YJR005w     APL1     AP-2 complex subunit, beta2-adaptin, 78 KD
YOL062c     APM4     AP-2 complex subunit, mu2 subunit, 55 KD
YJR058c     APS2     AP-2 complex subunit, sigma2 subunit, 17 KD
YGL017w     ATE1     arginyl tRNA transferase
YBR059c     AKL1     Ark-family Kinase-Like protein
YPL154c     PEP4     aspartyl protease
YDR144c     MKC7     aspartyl protease of the periplasmic space
YLR120c     YPS1     aspergillopepsin
YDR377w     ATP17    ATP synthase complex, subunit f
YBL022c     PIM1     ATP-dependent protease, mitochondrial
YGR105w     VMA21    ATPase assembly integral membrane protein
YIL015w     BAR1     barrierpepsin precursor
YBR110w     ALG1     beta-mannosyltransferase
YDL141w     BPL1     biotin holocarboxylase synthetase
YNL233w     BNI4     bud neck involved
YMR154c     RIM13    calpain-like cysteine protease
YGL203c     KEX1     carboxypeptidase (YSC-alpha)
YMR297w     PRC1     carboxypeptidase y, serine-type protease
YDR499w     LCD1     cell cycle checkpoint protein
YDR168w     CDC37    cell division control protein
YGL116w     CDC20    cell division control protein
YKL073w     LHS1     chaperone of the ER lumen
YBR044c     TCM62    chaperone required for assembly of mitochondrial succinate dehydrogenase
YIL142w     CCT2     chaperonin of the TCP1 ring complex, cytosolic
YJL014w     CCT3     chaperonin of the TCP1 ring complex, cytosolic
YOR020c     HSP10    chaperonin, mitochondrial
YBR195c     MSI1     chromatin assembly complex, subunit p50
YML102w     CAC2     chromatin assembly complex, subunit p60
YPR018w     RLF2     chromatin assembly complex, subunit p90
YMR101c     SRT1     cis-prenyltransferase homologue
YBR002c     RER2     cis-prenyltransferase, a key enzyme in dolichol synthesis
YKL002w     DID4     class E vacuolar-protein sorting and endocytosis factor
YKR035w-a   DID2     class E vacuolar-protein sorting and endocytosis factor
YLR025w     SNF7     class E Vps protein
YGL206c     CHC1     clathrin heavy chain
YLL050c     COF1     cofilin, actin binding and severing protein
YMR159c     APG16    coiled-coil protein required for autophagy
YOR181w     LAS17    component of actin cortical patches
YDL143w     CCT4     component of chaperonin-containing T-complex
YDR212w     TCP1     component of chaperonin-containing T-complex
YJL008c     CCT8     component of chaperonin-containing T-complex
YJL111w     CCT7     component of chaperonin-containing T-complex
YDR188w     CCT6     component of chaperonin-containing T-complex (zeta subunit)
YOR064c     YNG1     component of histone acetyltransferase complex, has similarity to human retinoblastoma binding protein 2
YOR023c     AHC1     component of the ADA histone acetyltransferase complex
YGL240w     DOC1     component of the anaphase promoting complex
YLR127c     APC2     component of the anaphase promoting complex
YOR249c     APC5     component of the anaphase-promoting complex
YBR217w     APG12    component of the autophagic system
YOR297c     TIM18    component of the inner mitochondrial membrane translocation complex
YDL132w     CDC53    controls G1/S transition
YMR038c     LYS7     copper chaperone for superoxide dismutase SOD1P
YNR028w     CPR8     Cyclophilin (peptidylprolyl cis-trans isomerase or PPIase)
YDR155c     CPH1     cyclophilin (peptidylprolyl isomerase)
YML078w     CPR3     cyclophilin (peptidylprolyl isomerase), mitochondrial
YHR109w     CTM1     cytochrome c methyltransferase
YER058w     PET117   cytochrome c oxidase assembly factor
YER141w     COX15    cytochrome oxidase assembly factor
YER154w     OXA1     cytochrome oxidase biogenesis protein
YDR079w     PET100   cytochrome-c oxidase assembly protein
YML129c     COX14    cytochrome-c oxidase assembly protein
YPL132w     COX11    cytochrome-c oxidase assembly protein
YDL067c     COX9     cytochrome-c oxidase chain VIIA
YLR038c     COX12    cytochrome-c oxidase, subunit VIB
YMR256c     COX7     cytochrome-c oxidase, subunit VII
YBL007c     SLA1     cytoskeleton assembly control protein
YNL243w     SLA2     cytoskeleton assembly control protein
YLR417w     VPS36    defective in vacuolar protein sorting
YJR135w-a   TIM8     delivers Proteins across the intermembrane space of mitochondria to the TIM22 complex
YNL186w     UBP10    derepression of telomeric silencing
YHR028c     DAP2     dipeptidyl aminopeptidase B
YOR288c     MPD1     disulfide isomerase related protein
YCR066w     RAD18    DNA repair protein
YER048c     CAJ1     dnaJ homolog
YIR004w     DJP1     DnaJ-like protein involved specifically in peroxisomal protein import
YPL227c     ALG5     dolichol-P-glucose synthetase
YJR143c     PMT4     dolichyl-phosphate-mannose--protein O-mannosyl transferase
YDR390c     UBA2     E1-like (ubiquitin-activating) enzyme
YKL210w     UBA1     E1-like (ubiquitin-activating) enzyme
YBR082c     UBC4     E2 ubiquitin-conjugating enzyme
YDL064w     UBC9     E2 ubiquitin-conjugating enzyme
YDR054c     CDC34    E2 ubiquitin-conjugating enzyme
YDR059c     UBC5     E2 ubiquitin-conjugating enzyme
YDR092w     UBC13    E2 ubiquitin-conjugating enzyme
YDR177w     UBC1     E2 ubiquitin-conjugating enzyme
YEL012w     UBC8     E2 ubiquitin-conjugating enzyme
YER100w     UBC6     E2 ubiquitin-conjugating enzyme
YGL058w     RAD6     E2 ubiquitin-conjugating enzyme
YLR306w     UBC12    E2 ubiquitin-conjugating enzyme
YGR133w     PEX4     E2 ubiquitin-conjugating enzyme - peroxin
YMR022w     QRI8     E2 ubiquitin-conjugation enzyme
YBR247c     ENP1     effects N-glycosylation
YDL212w     SHR3     endoplasmatic reticulum membrane protein
YNL238w     KEX2     endoproteinase of late golgi compartment
YKL041w     VPS24    endosomal Vps protein complex subunit
YIL076w     SEC28    epsilon-COP coatomer subunit
YBL040c     ERD2     ER lumen protein-retaining receptor
YDR086c     SSS1     ER protein-translocase complex subunit
YBR171w     SEC66    ER protein-translocation complex subunit
YER019c-a   SBH2     ER protein-translocation complex subunit
YLR292c     SEC72    ER protein-translocation complex subunit
YLR378c     SEC61    ER protein-translocation complex subunit
YOR254c     SEC63    ER protein-translocation complex subunit
YPL094c     SEC62    ER protein-translocation complex subunit
YGL180w     APG1     essential for autophagocytosis
YNR007c     AUT1     essential for autophagocytosis
YBL078c     AUT7     essential for autophagy
YNL223w     AUT2     essential for autophagy
YDR331w     GPI8     essential for GPI anchor attachment
YDR473c     PRP3     essential splicing factor
YEL020w-a   TIM9     essential subunit of the TIM22-complex for mitochondrial protein import
YOR123c     LEO1     extremely hydrophilic protein
YLR393w     ATP10    F1F0 ATPase complex assembly protein
YJL180c     ATP12    F1F0-ATPase complex assembly protein
YNL315c     ATP11    F1F0-ATPase complex assembly protein
YDR410c     STE14    farnesyl cysteine carboxyl-methyltransferase
YPL172c     COX10    farnesyl transferase
YPL231w     FAS2     fatty-acyl-CoA synthase, alpha chain
YDR519w     FKB2     FK506/rapamycin-binding protein of the ER
YMR203w     TOM40    forms the hydrophilic channel of the mitochondrial import pore for preproteins
YPR180w     AOS1     forms together with UBA2P a heterodimeric activating enzyme for SMT3P
YPL037c     EGD1     GAL4 DNA-binding enhancer protein
YJL031c     BET4     geranylgeranyl transferase, alpha chain
YGL155w     CDC43    geranylgeranyltransferase beta subunit
YOR370c     MRS6     geranylgeranyltransferase regulatory subunit
YPR176c     BET2     geranylgeranyltransferase type II beta subunit
YEL003w     GIM4     Gim complex component
YLR200w     YKE2     Gim complex component
YML094w     GIM5     Gim complex component
YNL153c     GIM3     Gim complex component
YGR078c     PAC10    GIM4 - Gim complex component
YOR002w     ALG6     glucosyltransferase
YOR067c     ALG8     glucosyltransferase
YJL172w     CPS1     Gly-X carboxypeptidase YSCS precursor
YIR039c     YPS6     GPI-anchored aspartic protease (Yapsin 6)
YLR121c     YPS3     GPI-anchored aspartyl protease 3 (yapsin 3)
YJR074w     MOG1     GSP1-interacting protein
YOR089c     VPS21    GTP-binding protein
YDL137w     ARF2     GTP-binding protein of the ARF family
YKR014c     YPT52    GTP-binding protein of the rab family
YNL093w     YPT53    GTP-binding protein of the RAB family (RAS superfamily)
YEL042w     GDA1     guanosine diphosphatase
YKL119c     VPH2     H+-ATPase assembly protein
YPL234c     TFP3     H+-ATPase V0 domain 17 KD subunit, vacuolar
YLR447c     VMA6     H+-ATPase V0 domain 36 KD subunit, vacuolar
YOR270c     VPH1     H+-ATPase V0 domain 95K subunit, vacuolar
YOR332w     VMA4     H+-ATPase V1 domain 27 KD subunit, vacuolar
YKL080w     VMA5     H+-ATPase V1 domain 42 KD subunit, vacuolar
YDL185w     TFP1     H+-ATPase V1 domain 69 KD catalytic subunit, vacuolar
YLL026w     HSP104   heat shock protein
YFL016c     MDJ1     heat shock protein - chaperone
YNL328c     MDJ2     heat shock protein - chaperone
YOR232w     MGE1     heat shock protein - chaperone
YLR259c     HSP60    heat shock protein - chaperone, mitochondrial
YDR258c     HSP78    heat shock protein of clpb family of ATP-dependent proteases, mitochondrial
YEL030w     ECM10    heat shock protein of HSP70 family
YAL005c     SSA1     heat shock protein of HSP70 family, cytosolic
YLL024c     SSA2     heat shock protein of HSP70 family, cytosolic
YER125w     RSP5     hect domain E3 ubiquitin-protein ligase
YGR252w     GCN5     histone acetyltransferase
YOR244w     ESA1     histone acetyltransferase
YPL001w     HAT1     histone acetyltransferase subunit
YEL066w     HPA3     histone and other protein acetyltransferase
YPR193c     HPA2     Histone and other Protein Acetyltransferase
YNL021w     HDA1     histone deacetylase A
YBR034c     HMT1     hnRNP methyltransferase
YAL039c     CYC3     holocytochrome-c synthase (cytochrome c heme lyase)
YKL087c     CYT2     holocytochrome-c1 synthase
YDL184w-a   PI-SCEI  homing endonuclease with protein splicing activity
YMR214w     SCJ1     homolog of E. coli DnaJ, functions in the endoplasmic reticulum by interaction with KAR2P
YKL117w     SBA1     Hsp90 (Ninety) Associated Co-chaperone
YDL053c              hypothetical protein
YGL238w     CSE1     importin-beta-like protein
YLL009c     COX17    interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly
YGR028w     MSP1     intra-mitochondrial sorting protein
YCR075c     ERS1     intracellular protein transport protein
YJR034w     PET191   involved in assembly of cytochrome oxidase
YPL149w     APG5     involved in autophagy and nutrient starvation
YBR283c     SSH1     involved in co-translational pathway of protein transport
YLR207w     HRD3     involved in degradation of HMG2P
YOL013c     HRD1     involved in degradation of HMG2P
YML088w     UFO1     involved in degradation of HO protein
YBR201w     DER1     involved in degradation proteins in the ER
YLR452c     SST2     involved in desensitization to alpha-factor pheromone
YOR069w     VPS5     involved in Golgi retention and vacuolar sorting
YCL031c     RRP7     involved in pre-rRNA processing and ribosome assembly
YPL003w     ULA1     involved in protein modification
YLL040c     VPS13    involved in regulating membrane traffic
YIL046w     MET30    involved in regulation of sulfur assimilation genes and cell cycle progression
YBR024w     SCO2     involved in stability of COX1P and COX2P
YBR037c     SCO1     involved in stabilization of COX1P and COX2P
YER101c     AST2     involved in targeting of plasma membrane [H+]ATPase
YER087c-b   SBH1     involved in translocation into the ER
YKL213c     DOA1     involved in ubiquitin-dependent proteolysis
YMR264w     CUE1     involved in ubiquitination and degradation at the ER surface
YHR012w     VPS29    involved in vacuolar protein sorting
YPL120w     VPS30    involved in vacuolare protein sorting and autophagy
YLR309c     IMH1     involved in vesicular transport
YNL189w     SRP1     karyopherin-alpha or importin
YLR347c     KAP95    karyopherin-beta
YPR141c     KAR3     kinesin-related protein
YDR328c     SKP1     kinetochore protein complex CBF3, subunit D
YMR246w     FAA4     long-chain-fatty-acid--CoA ligase
YOL122c     SMF1     manganese transporter
YPL053c     KTR6     mannosylphosphate transferase
YAL023c     PMT2     mannosyltransferase
YBL082c     RHK1     mannosyltransferase
YDL095w     PMT1     mannosyltransferase
YGL065c     ALG2     mannosyltransferase
YOR321w     PMT3     mannosyltransferase
YOR099w     KTR1     mannosyltransferase involved in n-linked and o-linked glycosylation
YER047c     SAP1     member of the AAA-protein family
YJR032w     CPR7     member of the cyclophilin family
YLR216c     CPR6     member of the cyclophilin family
YKR001c     VPS1     member of the dynamin family of GTPases
YNL239w     LAP3     member of the GAL regulon
YGL016w     KAP122   Member of the karyopherin-beta family, nuclear import
YGL241w     KAP114   Member of the karyopherin-beta family, nuclear import
YDR098c     GRX3     member of the subfamily of yeast glutaredoxins (Grx3, GRX4, and Grx5)
YER174c     GRX4     member of the subfamily of yeast glutaredoxins (Grx3, GRX4, and Grx5)
YPL059w     GRX5     member of the subfamily of yeast glutaredoxins (Grx3, GRX4, and Grx5)
YDR468c     TLG1     member of the syntaxin family of t-SNAREs
YOL018c     TLG2     member of the syntaxin family of t-SNAREs
YMR292w     GOT1     Membrane protein required for ER to Golgi transport
YLR244c     MAP1     methionine aminopeptidase, isoform 1
YBL091c     MAP2     methionine aminopeptidase, isoform 2
YDL126c     CDC48    microsomal protein of CDC48/PAS1/SEC18 family of ATPases
YNL064c     YDJ1     mitochondrial and ER import protein
YML062c     MFT1     mitochondrial fusion target protein
YLR369w     SSQ1     mitochondrial heat shock protein 70
YJR045c     SSC1     mitochondrial heat shock protein 70-related protein
YIL022w     TIM44    mitochondrial inner membrane import receptor subunit
YJL143w     TIM17    mitochondrial inner membrane import translocase subunit
YNR017w     MAS6     mitochondrial inner membrane import translocase subunit
YMR152w     YIM1     mitochondrial inner membrane protease
YMR035w     IMP2     mitochondrial inner membrane protease subunit
YKL134c     OCT1     mitochondrial intermediate peptidase
YNL121c     TOM70    mitochondrial outer membrane  specialized import receptor
YNL131w     TOM22    mitochondrial outer membrane import receptor complex subunit
YGR082w     TOM20    mitochondrial outer membrane import receptor subunit, 20 kD
YMR060c     TOM37    mitochondrial outer membrane import receptor subunit, 37 kD
YOR045w     TOM6     mitochondrial outer membrane import receptor subunit, 6 kD
YNL070w     TOM7     mitochondrial outer membrane import receptor subunit, 7 kD
YLR163c     MAS1     mitochondrial processing peptidase
YDR375c     BCS1     mitochondrial protein of the CDC48/PAS1/SEC18 (AAA) family of ATPases
YMR274c     RCE1     modulator of RAS2P
YGL018c     JAC1     molecular chaperone
YPL085w     SEC16    multidomain vesicle coat protein
YPR051w     MAK3     N-acetyltransferase
YGR147c     NAT2     N-acetyltransferase for N-terminal methionine
YPR131c     NAT3     N-acetyltransferases
YLR195c     NMT1     N-myristoyltransferase
YML019w     OST6     N-oligosaccharyltransferase complex subunit
YDR162c     NBP2     NAP1P-binding protein
YLR144c     ACF2     necessary for cortical actin assembly
YJL034w     KAR2     nuclear fusion protein
YMR091c     NPL6     nuclear protein localization factor
YBR170c     NPL4     nuclear protein localization factor and ER translocation component
YPL125w     KAP120   nuclear transport factor, member of karyopherin-beta family
YLR449w     FPR4     nucleolar peptidylprolyl cis-trans isomerase (PPIase)
YDR432w     NPL3     nucleolar protein
YOL144w     NOP8     nucleolar protein required for 60S ribosome biogenesis
YKR048c     NAP1     nucleosome assembly protein I
YDL093w     PMT5     O-mannosyltransferase similarity to PMT1P-PMT4P
YEL002c     WBP1     oligosaccharyl transferase beta subunit precursor
YGL022w     STT3     oligosaccharyl transferase subunit
YMR149w     SWP1     oligosaccharyltransferase delta subunit
YOR103c     OST2     oligosaccharyltransferase epsilon subunit
YOR085w     OST3     oligosaccharyltransferase gamma subunit
YDL232w     OST4     oligosaccharyltransferase subunit
YJL002c     OST1     oligosaccharyltransferase, alpha subunit
YAR002c-a   ERP1     p24 protein involved in membrane trafficking
YHR057c     CYP2     peptidyl-prolyl cis-trans isomerase
YDR304c     CYP5     peptidyl-prolyl cis-trans isomerase D precursor(cyclophilin D) of the ER
YCR069w     SCC3     peptidyl-prolyl cis-trans isomerase precursor
YNL135c     FPR1     peptidyl-prolyl cis-trans isomerase, FK506-binding protein
YGR239c     PEX21    peroxin, essential for peroxisomal targeting by the PTS2 pathway
YHR160c     PEX18    peroxin, essential for peroxisomal targeting by the PTS2 pathway
YNL329c     PEX6     peroxisomal assembly protein
YDR265w     PEX10    peroxisomal assembly protein - peroxin
YKL197c     PEX1     peroxisomal assembly protein - peroxin
YDR142c     PEX7     peroxisomal import protein - peroxin
YGL153w     PEX14    peroxisomal protein involved in protein import - peroxin
YLR191w     PEX13    peroxisomal protein involved in protein import - peroxin
YDR244w     PEX5     peroxisomal targeting signal receptor
YPR047w     MSF1     phenylalanine--tRNA ligase alpha chain, mitochondrial
YFR019w     FAB1     phosphatidylinositol 3-phosphate 5-kinase
YFL045c     SEC53    phosphomannomutase
YPL148c     PPT2     phosphopantetheine protein transferase
YLL010c     PSR1     plasma membrane phosphatase involved in sodium stress response
YLR019w     PSR2     plasma membrane phosphatase required for sodium stress response
YBL069w     AST1     PMA1 protein targeting protein
YBR165w     UBS1     positive regulator of CDC34P
YGR232w     NAS6     possible homolog of human 26S proteasome regulatory subunit p28
YBR237w     PRP5     pre-mRNA processing RNA-helicase
YJL203w     PRP21    pre-mRNA splicing factor
YJL179w     PFD1     Prefoldin subunit 1
YHR050w     SMF2     probable manganese transporter
YLR168c     (MSF1)   probably involved in intramitochondrial protein sorting
YHR024c     MAS2     processing peptidase, catalytic 53kDa (alpha) subunit, mitochondrial
YML074c     NPI46    proline cis-trans isomerase
YPR122w     AXL1     protease
YMR174c     PAI3     protease A (ysca) inhibitor IA3
YEL060c     PRB1     protease B, vacuolar
YLR389c     STE23    protease involved in a-factor processing
YER017c     AFG3     protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)
YMR089c     YTA12    protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)
YPR024w     YME1     protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)
YMR150c     IMP1     protease, mitochondrial
YBR173c     UMP1     proteasome maturation factor
YDR518w     EUG1     protein disulfide isomerase
YOL088c     MPD2     protein disulfide isomerase-related protein
YCL043c     PDI1     protein disulfide-isomerase precursor
YKL019w     RAM2     protein farnesyltransferase, alpha subunit
YDL090c     RAM1     protein farnesyltransferase, beta subunit
YLR423c     APG17    protein involved in authophagy
YLR246w     ERF2     protein involved in palmitoylation and localization of RAS2P
YLR360w     VPS38    protein involved in vacuolar sorting
YFL033c     RIM15    protein kinase involved in expression of meiotic genes
YDL040c     NAT1     protein N-acetyltransferase subunit
YHR013c     ARD1     protein N-acetyltransferase subunit
YKL176c     LST4     protein required for regulated transport of nitrogen-regulated permeases from the Golgi to the plasma membrane
YPR185w     APG13    protein required for the autophagic process
YPL096w     PNG1     protein with de-N-glycosylation function
YLL042c     APG10    protein-conjugating enzyme essential for autophagy
YJL154c     VPS35    protein-sorting protein, vacuolar
YNL015w     PBI2     proteinase B inhibitor 2
YCL057w     PRD1     proteinase yscD
YOR090c     PTC5     putative 2C protein phosphatase (PP2Cs)
YIL085c     KTR7     putative alpha-1,2-mannosyltransferase
YGL194c     HOS2     putative histone deacetylase
YGR199w     PMT6     putative mannosyltransferase
YNL029c     KTR5     putative mannosyltransferase
YER110c     KAP123   RAN-binding protein
YKL201c     MNN4     regulates the mannosylphosphorylation
YKL193c     SDS22    regulatory subunit for the mitotic function of type I protein phosphatase
YJL183w     MNN11    related to MNN10P, and in a complex containing other MNN gene products
YNL048w     ALG11    required for asparagine-linked glycosylation
YPL215w     CBP3     required for assembly of cytochrome bc1 complex
YLR088w     GAA1     required for attachment of GPI anchor onto proteins
YBR128c     APG14    required for autophagy
YPL050c     MNN9     required for complex N-glycosylation
YCL001w     RER1     required for correct localization of SEC12P
YGR036c     CAX4     required for full levels of dolichol-linked oligosaccharides in the endoplasmic reticulum
YEL059c-a   SOM1     required for mitochondrial IMP1 peptidase function
YCL052c     PBN1     required for post-translational processing of the protease B precursor PRB1P
YML130c     ERO1     required for protein disulfide bond formation in the ER
YEL036c     ANP1     required for protein glycosylation in the golgi
YDR414c     ERD1     required for retention of luminal ER proteins
YDR005c     MAF1     required for sorting of MOD5P
YDR080w     VPS41    required for the vacuolar assembly
YBR105c     VID24    required for vacuolar import and degradation of FBP1P
YMR004w     MVP1     required for vacuolar protein sorting
YCL008c     STP22    required for vacuolar targeting of temperature-sensitive plasma membrane proteins, STE2P and CAN1P
YEL013w     VAC8     required for vacuole inheritance and protein targeting from the cytoplasm to vacuole
YBR185c     MBA1     respiratory chain assembly protein
YLL008w     DRS1     RNA helicase of the DEAD box family
YNR038w     DBP6     RNA helicase required for 60S ribosomal subunit assembly
YBR162w-a   YSY6     secretory pathway protein
YDR498c     SEC20    secretory pathway protein
YBR097w     VPS15    ser/thr protein kinase
YJR010c-a   SPC1     signal peptidase 10.8 kDa subunit
YML055w     SPC2     signal peptidase 18 KD subunit
YLR066w     SPC3     signal peptidase subunit
YPL210c     SRP72    signal recognition particle protein
YPL243w     SRP68    signal recognition particle protein
YDR292c     SRP101   signal recognition particle receptor, alpha chain
YKL154w     SRP102   signal recognition particle receptor, beta chain
YDL092w     SRP14    signal recognition particle subunit
YKL122c     SRP21    signal recognition particle subunit
YML105c     SEC65    signal recognition particle subunit
YIR022w     SEC11    signal sequence processing protein
YDL042c     SIR2     silencing regulatory protein and DNA-repair protein
YNR069c              similarity to central part of BUL1P
YOR285w              similarity to D.melanogaster heat shock protein 67B2
YOR286w              similarity to D.melanogaster heat shock protein 67B2
YNL077w              similarity to dnaJ protein homolog YDJ1
YMR161w     HLJ1     similarity to dnaJ proteins
YNL227c              similarity to dnaJ-like proteins
YBR227c     MCX1     similarity to E.coli ATP-binding protein clpX
YLR090w     XDJ1     similarity to E.coli dnaJ
YER078c              similarity to E.coli X-Pro aminopeptidase II
YDL104c     QRI7     similarity to H.influenzae sialoglycoprotease (gcp)
YJL073w     JEM1     similarity to heat shock proteins
YOR016c     ERP4     similarity to human COP-coated vesicle membrane protein
YHR110w     ERP5     similarity to human gp25L2 protein
YNL148c     ALF1     similarity to human tubulin folding cofactor B
YMR304w     UBP15    similarity to human ubiquitin-specific protease
YDR330w              similarity to hypothetical S. pombe protein
YIL137c              similarity to M.musculus aminopeptidase
YMR223w     UBP8     similarity to mouse deubiquitinating enzyme and UBP13P,UBP9,DOA4P
YDR117c              similarity to mouse ligatin, a trafficking receptor for phosphoglycoproteins
YDR307w              similarity to PMT1P, PMT2P, PMT3P and PMT5P
YDR435c     PPM1     similarity to PPM2P and hypothetical C.elegans protein
YDR140w     FYV9     similarity to probable methyltransferase S. pombe
YIL005w              similarity to protein disulfide isomerases
YKR038c              similarity to QRI7P
YKL010c     UFD4     similarity to rat ubiquitin ligase Nedd4
YCR045c              similarity to serin proteases
YMR018w              similarity to tetratricopeptide-repeat protein PAS10
YNR059w     MNT4     similarity to to alpha-1,3-mannosyltransferase
YHR113w              similarity to vacuolar aminopeptidase Ape1p
YPL074w     YTA6     similarity to VPS4P and YER047c
YFR006w              similarity to X-Pro dipeptidases
YLR387c              similarity to YBR267w
YOL141w     PPM2     similarity to YDR435c and C.elegans hypothetical protein
YDL192w     ARF1     small GTP-binding protein of the ARF family
YIL031w     ULP2     SMT3P-specific protease, degrades conjugated ubiquitin-like protein SMT3P
YKL196c     YKT6     SNARE protein for Endoplasmic Reticulum-Golgi transport
YHL031c     GOS1     SNARE protein of Golgi compartment
YGR074w     SMD1     snRNA-associated protein
YDR415c              strong similarity to bacterial leucyl aminopeptidase
YBR139w              strong similarity to carboxypeptidase
YOL153c              strong similarity to CPS1P
YIL113w              strong similarity to dual-specificity phosphatase MSG5P
YOR339c     UBC11    strong similarity to E2 ubiquitin-conjugating enzymes
YGL002w     ERP6     strong similarity to human gp25L2 protein
YBR214w     SDS24    strong similarity to hypothetical protein YGL056c
YEL004w     YEA4     strong similarity to K.lactis golgi uridine diphosphate-N-acetylglucosamine transporter
YDR185c              strong similarity to MSF1P
YJL222w     VTH2     strong similarity to PEP1P
YCR099c              strong similarity to PEP1P, VTH1P and VTH22p
YCR100c              strong similarity to PEP1P, VTH1P and VTH22p
YCR101c              strong similarity to PEP1P, VTH1P and VTH22p
YLR410w     VIP1     strong similarity to S. pombe protein ASP1P
YLR327c              strong similarity to STF2P
YML111w     BUL2     strong similarity to ubiquitination protein BUL1P
YIL173w     VTH1     strong similarity to VTH2P and PEP1P, potential membrane glycoprotein
YOR134w     BAG7     structural homolog of SAC7P
YGL003c     CDH1     substrate-specific activator of APC-dependent proteolysis
YOR003w     YSP3     subtilisin-like protease III
YDR322c-a   TIM11    subunit E of the dimeric form of mitochondrial F1F0-ATPase
YBL084c     CDC27    subunit of anaphase-promoting complex (cyclosome)
YFR036w     CDC26    subunit of anaphase-promoting complex (cyclosome)
YHR166c     CDC23    subunit of anaphase-promoting complex (cyclosome)
YKL022c     CDC16    subunit of anaphase-promoting complex (cyclosome)
YNL172w     APC1     subunit of anaphase-promoting complex (cyclosome)
YPL086c     ELP3     subunit of elongator/RNAPII holoenzyme with histone acetylase activity
YDR245w     MNN10    subunit of mannosyltransferase complex
YGL226c-a   OST5     subunit of N-oligosaccharyltransferase, zeta subunit
YDL008w     APC11    subunit of the anaphase promoting complex
YDR118w     APC4     subunit of the anaphase promoting complex
YLR102c     APC9     subunit of the Anaphase Promoting Complex
YEL056w     HAT2     subunit of the major yeast histone acetyltransferase
YDL097c     RPN6     subunit of the regulatory particle of the proteasome
YDL147w     RPN5     subunit of the regulatory particle of the proteasome
YDR427w     RPN9     subunit of the regulatory particle of the proteasome
YPR108w     RPN7     subunit of the regulatory particle of the proteasome
YBR091c     MRS5     subunit of the TIM22-complex
YDL217c     TIM22    subunit of the TIM22-complex
YHR005c-a   MRS11    subunit of the TIM22-complex
YIR012w     SQT1     suppresses dominant-negative mutants of the ribosomal protein QSR1
YDR389w     SAC7     suppressor of actin mutation
YOR329c     SCD5     suppressor of clathrin deficiency
YOR057w     SGT1     suppressor of G2 allele of SKP1
YJR075w     HOC1     suppressor of PKC1
YOR327c     SNC2     synaptobrevin (v-SNARE) homolog present on post-Golgi vesicles
YOR106w     VAM3     syntaxin (t-SNARE)
YOR036w     PEP12    syntaxin (T-SNARE), vacuolar
YJR064w     CCT5     T-complex protein 1, epsilon subunit
YDR460w     TFB3     TFIIH subunit (transcription/repair factor)
YLR043c     TRX1     thioredoxin I
YGR209c     TRX2     thioredoxin II
YJL125c     GCD14    translational repressor of GCN4
YJL054w     TIM54    translocase for the insertion of proteins into the mitochondrial inner membrane
YOR219c     STE13    type IV dipeptidyl aminopeptidase
YPL213w     LEA1     U2 A' snRNP protein
YIR009w     MSL1     U2 snRNA-associated protein with similarity to U2B
YPR178w     PRP4     U4/U6 snRNP 52 KD protein
YPR191w     QCR2     ubiquinol--cytochrome-c reductase 40KD chain II
YGR174c     CBP4     ubiquinol--cytochrome-c reductase assembly factor
YGL119w     ABC1     ubiquinol--cytochrome-c reductase complex assembly protein
YIL148w     RPL40A   ubiquitin
YKR094c     RPL40B   ubiquitin
YLL039c     UBI4     ubiquitin
YJL197w     UBP12    ubiquitin C-terminal hydrolase
YKR098c     UBP11    ubiquitin C-terminal hydrolase
YIL156w     UBP7     ubiquitin carboxy terminal hydrolase
YBL067c     UBP13    ubiquitin carboxyl-terminal hydrolase
YER098w     UBP9     ubiquitin carboxyl-terminal hydrolase
YDL190c     UFD2     ubiquitin fusion degradation protein
YGR048w     UFD1     ubiquitin fusion degradation protein
YIL008w     URM1     ubiquitin related modifier
YBR058c     UBP14    ubiquitin specific protease
YDR139c     RUB1     ubiquitin-like protein
YDR510w     SMT3     ubiquitin-like protein
YPR066w     UBA3     ubiquitin-like protein activating enzyme
YGR184c     UBR1     ubiquitin-protein ligase
YDL122w     UBP1     ubiquitin-specific protease
YDR069c     DOA4     ubiquitin-specific protease
YER144c     UBP5     ubiquitin-specific protease
YFR010w     UBP6     ubiquitin-specific protease
YJR099w     YUH1     ubiquitin-specific protease
YER151c     UBP3     ubiquitin-specific proteinase
YOR124c     UBP2     ubiquitin-specific proteinase
YLR167w     RPS31    ubiquitin/40S small subunit ribosomal protein
YMR275c     BUL1     ubiquitination pathway protein
YPL020c     ULP1     Ubl-specific protease
YBR243c     ALG7     UDP-N-acetylglucosamine-1-phosphate transferase
YKL035w     UGP1     UTP--glucose-1-phosphate uridylyltransferase
YLR093c     NYV1     v-SNARE, vacuolar
YMR197c     VTI1     v-SNARE: involved in Golgi retrograde protein traffic
YBR286w     APE3     vacuolar aminopeptidase Y
YAL048c              vacuolar aspartic proteasse
YHR060w     VMA22    vacuolar ATPase assembly protein
YMR231w     PEP5     vacuolar biogenesis protein
YDL077c     VAM6     vacuolar carboxypeptidase Y
YLR148w     PEP3     vacuolar membrane protein
YNL054w     VAC7     vacuolar protein
YGL095c     VPS45    vacuolar protein sorting-associated protein
YNR006w     VPS27    vacuolar protein sorting-associated protein
YOR132w     VPS17    vacuolar protein sorting-associated protein
YBL017c     PEP1     vacuolar protein sorting/targeting protein
YJL053w     PEP8     vacuolar protein sorting/targeting protein
YDR323c     PEP7     vacuolar segregation protein
YDR495c     VPS3     vacuolar sorting protein
YLR396c     VPS33    vacuolar sorting protein
YML097c     VPS9     vacuolar sorting protein
YPL045w     VPS16    vacuolar sorting protein
YPR173c     VPS4     vacuolar sorting protein
YAL002w     VPS8     vacuolar sorting protein, 134 kD
YML115c     VAN1     vanadate resistance protein
YJR097w              weak similarity to CAJ1P
YFR041c              weak similarity to dnaJ-like heat shock proteins
YGL227w     VID30    weak similarity to human RANBPM NP_005484.1
YOR357c     GRD19    weak similarity to human sorting nexin 1
YOL111c              weak similarity to human ubiquitin-like protein GDX
YJL036w     SNX4     weak similarity to MVP1P
YDR171w     HSP42    weak similarity to Streptomyces HSP18 protein
YPL072w     UBP16    weak similarity to UBP11P
YGR241c     YAP1802  Yeast Adaptor Protein, member of AP180 protein family
YHR161c     YAP1801  Yeast Adaptor Protein, member of AP180 protein family
YER005w     YND1     Yeast Nucleoside Diphosphatase
YJR117w     STE24    zinc metallo-protease

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