# Makefile to update the electronic bibliographies
# Jean-Philippe.Vert@mines.org
# January 30, 2002

# the main file is bibli.bib
BIBLI = bibli
SRCBIBLI = ../$(BIBLI).bib

# the different categories in the "subject" field of the bibtex entries
SUBJECTS = chemogenomics biogm biosvm sirna dimred cancer information-theory source-coding conditional-random-field qsar bio stat ml it kernel bionet net compnet biokernel microarray casp prot plasmodium chemoinformatics csbcbook csbcbook-ch1 csbcbook-ch2 csbcbook-ch3 csbcbook-ch4 csbcbook-ch5 csbcbook-ch6 csbcbook-ch7 csbcbook-ch8 csbcbook-ch9 ngs rnaseq hic


all: $(BIBLI:=.html) $(SUBJECTS:=.html)
	chmod 755 *.html *.bib

# Create *.bib files for each category 
$(SUBJECTS:=.bib): $(SRCBIBLI)
	bib2bib $^ -c 'subject:"$(@:.bib=)" or keywords:"$(@:.bib=)"' -ob tmp.bib ; ./addpdfpath.pl < tmp.bib > $@ ; rm tmp.bib

# Create a .html file from a .bib file
$(SUBJECTS:=.html):  %.html:%.bib
	bibtex2html -bg white -both -use-keys --sort-by-date -t "$* references" $< ; chmod 755 $@

$(BIBLI:=.html): $(SRCBIBLI)
	./addpdfpath.pl < $(SRCBIBLI) > $(BIBLI:=.bib) ; bibtex2html -bg white -both -use-keys --sort-by-date -t "$* references"  $(BIBLI:=.bib)


clean:
	rm -f *.bib *.html