Supervised reconstruction of biological networks with local models

Kevin Bleakley, Gérard Biau and Jean-Philippe Vert

Bioinformatics, 23(13):i57-i65, 2007

The paper

Data (27Mb)

Contains all data used in the paper, in MATLAB format.


The following MATLAB functions were used in the paper:

Although we use the simpleSVM implementation of a support vector machine, it should be straightforward to adapt the code to any SVM implementation. You also need the rocanalysis.m and metriclearning.m functions on the path.

Vert Jean-Philippe
Last modified: Mon Nov 26 16:14:21 CET 2007