General examples¶

General-purpose and introductory examples for the iced.

Data sets¶

Examples concerning the iced.datasets module.

../_images/sphx_glr_plot_yeast_sample_thumb.png

Yeast sample data

Normalization¶

Examples concerning the iced.normalization module.

../_images/sphx_glr_plot_loic_normalization_thumb.png

Normalizing a cancer contact count matrix with LOIC

../_images/sphx_glr_plot_filtering_strategies_thumb.png

Different filtering strategies

../_images/sphx_glr_plot_ice_normalization_thumb.png

Normalizing a contact count matrix

../_images/sphx_glr_plot_caic_normalization_thumb.png

Normalizing a cancer contact count matrix with CAIC

Utils¶

Examples concerning the iced.utils module.

../_images/sphx_glr_plot_extract_sample_map_thumb.png

Extracting parts of a contact map

../_images/sphx_glr_plot_intra_inter_contact_maps_thumb.png

Extracting parts of a contact map

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